BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D10SP1|AL429221
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1385 1903 0.0
>3x_Contig1385
Length = 5361
Score = 1903 bits (956), Expect = 0.0
Identities = 971/978 (99%), Gaps = 1/978 (0%)
Strand = Plus / Plus
Query: 1 aacaccatcggttgcagcgaccaataaggtttcatcagtattgtaaccagcggctttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3629 aacaccatcggttgcagcgaccaataaggtttcatcagtattgtaaccagcggctttcaa 3688
Query: 61 gtcaaacaaaccaccaaaaccaccgatatcagagtcagtaccaggtctgctggtagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3689 gtcaaacaaaccaccaaaaccaccgatatcagagtcagtaccaggtctgctggtagactt 3748
Query: 121 aactgtagctttaatcttttgcactaaaagatttccgttatcgacggaaacacctgcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3749 aactgtagctttaatcttttgcactaaaagatttccgttatcgacggaaacacctgcttc 3808
Query: 181 ggcataggtgattgactttccagcagaggcagctgaattcttgaaggcgcgatgagcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3809 ggcataggtgattgactttccagcagaggcagctgaattcttgaaggcgcgatgagcaat 3868
Query: 241 atcttttctaaagtatctgttgctaaattgaacagattctacaccttcataagctttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3869 atcttttctaaagtatctgttgctaaattgaacagattctacaccttcataagctttgtc 3928
Query: 301 gacggcttctttcaaagttggggcaacagcagaagatgcaatcactctaccaccattagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3929 gacggcttctttcaaagttggggcaacagcagaagatgcaatcactctaccaccattagt 3988
Query: 361 gtacacttttccgttatcagatttcgtgccagcatggaaaatgtaggtatcagttggaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3989 gtacacttttccgttatcagatttcgtgccagcatggaaaatgtaggtatcagttggaat 4048
Query: 421 cttcgaagaatcaaccgtaatctcgtctcccttcttgtatgactctgggtagccaccagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4049 cttcgaagaatcaaccgtaatctcgtctcccttcttgtatgactctgggtagccaccagc 4108
Query: 481 agcwaaaactacagtagtagcatagcagttgtccttgattttgatgtcaactgaatccaa 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4109 agctaaaactacagtagtagcatagcagttgtccttgattttgatgtcaactgaatccaa 4168
Query: 541 tctatgttcagcagctgctaaaaagacttgagccaaatcggtgtcttcagtcaacaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4169 tctatgttcagcagctgctaaaaagacttgagccaaatcggtgtcttcagtcaacaatgg 4228
Query: 601 caagactgtttgcgtttctgggtcaccaaatctaacattgtactctaataccttgggacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4229 caagactgtttgcgtttctgggtcaccaaatctaacattgtactctaataccttgggacc 4288
Query: 661 gttcttagtcaagatgataccagtaaacaagacaccgacaaatggcaatttgtcctttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4289 gttcttagtcaagatgataccagtaaacaagacaccgacaaatggcaatttgtcctttct 4348
Query: 721 cataccatcaatacttggtttgacaatagtcttatcaatttgttccaacaactttggagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4349 cataccatcaatacttggtttgacaatagtcttatcaatttgttccaacaactttggagt 4408
Query: 781 agcaacaggtgccggagcataagcacccataccaccagtgttcaaaccggtgtcattttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4409 agcaacaggtgccggagcataagcacccataccaccagtgttcaaaccggtgtcattttc 4468
Query: 841 accaattctcttatggtcttgggctggtggtaggttaaagtatgagtaaccgtctgaraw 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4469 accaattctcttatggtcttgggctggtggtaggttaaagtatgagtaaccgtctgagat 4528
Query: 901 tgtmaagatggagarttcatctccttccaagaattcttcaatgamaacgcttttaccagc 960
||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4529 tgtcaagatggagatttcatctccttccaagaattcttcaatgacaacgcttttaccagc 4588
Query: 961 gt-accgaattgtctttc 977
|| |||||||||||||||
Sbjct: 4589 gtcaccgaattgtctttc 4606
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6715
Number of Sequences: 1807
Number of extensions: 6715
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)